Bug fix for #26

Make sure debug log does not output integers, but only mysqli_result object in db_helper
Couple other fixes

classes/scan.inc

@@ -104,7 +104,7 @@ class scan
     /**
      * Enum defining the type of script
      *
-     * @var file_types
+     * @var string
      */
     protected $type = null;
 
@@ -419,7 +419,7 @@ class scan
     /**
      * Getter function for the scan type
      *
-     * @return file_types
+     * @return string
      */
     public function get_Type()
     {
@@ -429,7 +429,7 @@ class scan
     /**
      * Setter function for the scan type
      *
-     * @param file_types $type_in
+     * @param string $type_in
      */
     public function set_Type($type_in)
     {
@@ -512,6 +512,30 @@ class scan
         $this->status = $status_in;
     }
 
+    /**
+     * Method to check if the scan has been terminated by the user
+     */
+    public function isTerminated()
+    {
+        global $db, $log;
+        $db->help->select("scans", ['status'], [
+            [
+                'field' => 'id',
+                'op'    => '=',
+                'value' => $this->id
+            ]
+        ]);
+        $thread_status = $db->help->execute();
+
+        $this->status = $thread_status['status'];
+
+        if ($this->status == TERMINIATED) {
+            rename(realpath(TMP . "/{$this->file_name}"), TMP . "/terminated/{$this->file_name}");
+            $log->notice("File parsing terminated by user");
+            die();
+        }
+    }
+
     /**
      * Getter function for the percentage the script has completed
      *

exec/parse_excel_echecklist.php

@@ -126,19 +126,7 @@ foreach ($objSS->getWorksheetIterator() as $wksht) {
         continue;
     }
 
-    $db->help->select("scans", ['status'], [
+$scan->isTerminated();
-        [
-            'field' => 'id',
-            'op'    => '=',
-            'value' => $scan->get_ID()
-        ]
-    ]);
-    $thread_status = $db->help->execute();
-    if ($thread_status['status'] == 'TERMINATED') {
-        unset($objSS);
-        rename(realpath(TMP . "/{$scan->get_File_Name()}"), TMP . "/terminated/{$scan->get_File_Name()}");
-		$log->notice("File parsing terminated by user");
-    }
 
 	$log->notice("Reading from {$wksht->getTitle()}");
 
@@ -163,35 +151,26 @@ foreach ($objSS->getWorksheetIterator() as $wksht) {
         'notes'          => 9,
         'check_contents' => 10
     ];
-    $finding_count   = [];
     $tgts            = [];
     $short_title_col = Coordinate::stringFromColumnIndex($idx['short_title']);
-    $row_count       = $wksht->getHighestDataRow() - 10;
+    $row_count       = $highestRow = $wksht->getHighestDataRow() - 10;
+    $highestCol      = $wksht->getHighestDataColumn(10);
 
-    foreach ($wksht->getRowIterator(10) as $row) {
+    for ($col = 'F' ; $col != $highestCol ; $col++) {
-        foreach ($row->getCellIterator() as $cell) {
+        $cell = $wksht->getCell($col . '10');
+        $log->debug("Checking column: {$cell->getColumn()} {$cell->getCoordinate()}");
         $ip            = null;
-            $db->help->select("scans", ['status'], [
-                [
-                    'field' => 'id',
-                    'op'    => '=',
-                    'value' => $scan->get_ID()
-                ]
-            ]);
-            $thread_status = $db->help->execute();
-            if ($thread_status['status'] == 'TERMINATED') {
-                unset($objSS);
-                rename(realpath(TMP . "/{$scan->get_File_Name()}"), TMP . "/terminated/{$scan->get_File_Name()}");
-				die($log->notice("File parsing terminated by user"));
-            }
 
-            if ($cell->getColumn() > $short_title_col && !preg_match('/Overall/i', $cell->getValue())) {
+        $scan->isTerminated();
+
+        if (!preg_match('/Overall/i', $cell->getValue())) {
             if (preg_match('/status/i', $cell->getValue())) {
 				$log->error("Invalid host name ('status') in {$wksht->getTitle()}");
                 break;
             }
 
             if ($tgt_id = $db->check_Target($conf['ste'], $cell->getValue())) {
+                $log->debug("Found host for {$cell->getValue()}");
                 $tgt = $db->get_Target_Details($conf['ste'], $tgt_id);
                 if (is_array($tgt) && count($tgt) && isset($tgt[0]) && is_a($tgt[0], 'target')) {
                     $tgt = $tgt[0];
@@ -201,6 +180,7 @@ foreach ($objSS->getWorksheetIterator() as $wksht) {
                 }
             }
             else {
+                $log->debug("Creating new target {$cell->getValue()}");
                 $tgt = new target($cell->getValue());
                 $tgt->set_OS_ID($gen_os->get_ID());
                 $tgt->set_STE_ID($conf['ste']);
@@ -218,6 +198,7 @@ foreach ($objSS->getWorksheetIterator() as $wksht) {
 
             $tgts[] = $tgt;
 
+            $log->debug("Adding new target to host list", ['row_count' => $row_count, 'tgt_id' => $tgt->get_ID(), 'tgt_name' => $tgt->get_Name()]);
             $hl = new host_list();
             $hl->setFindingCount($row_count);
             $hl->setTargetId($tgt->get_ID());
@@ -239,11 +220,10 @@ foreach ($objSS->getWorksheetIterator() as $wksht) {
         }
 
         if (preg_match('/Overall/i', $cell->getValue())) {
+            $log->debug("Found overall: {$cell->getColumn()}");
             break;
         }
     }
-        break;
-    }
 
     $db->update_Running_Scan($base_name, ['name' => 'host_count', 'value' => count($tgts)]);
 
@@ -267,6 +247,18 @@ foreach ($objSS->getWorksheetIterator() as $wksht) {
     $title_col = Coordinate::stringFromColumnIndex($idx['short_title']);
     $notes_col = Coordinate::stringFromColumnIndex($idx['notes']);
 
+    $log->debug("Columns", [
+        'stig_col' => $stig_col,
+        'vms_col' => $vms_col,
+        'cat_col' => $cat_col,
+        'ia_col' => $ia_col,
+        'title_col' => $title_col,
+        'overall_col' => Coordinate::stringFromColumnIndex($idx['overall']),
+        'consistent_col' => Coordinate::stringFromColumnIndex($idx['consistent']),
+        'check_contents_col' => Coordinate::stringFromColumnIndex($idx['check_contents']),
+        'notes_col' => $notes_col
+    ]);
+
     $new_findings     = [];
     $updated_findings = [];
     $row_count = 0;
@@ -278,6 +270,9 @@ foreach ($objSS->getWorksheetIterator() as $wksht) {
         $notes       = $wksht->getCell("{$notes_col}{$row->getRowIndex()}")->getValue();
 
         $stig = $db->get_Stig($stig_id);
+        if($row->getRowIndex() % 10 == 0) {
+            $scan->isTerminated();
+        }
 
         if (is_array($stig) && count($stig) && isset($stig[0]) && is_a($stig[0], 'stig')) {
             $stig = $stig[0];
@@ -304,6 +299,7 @@ foreach ($objSS->getWorksheetIterator() as $wksht) {
             $finding = $db->get_Finding($tgt, $stig);
 
             if (is_array($finding) && count($finding) && isset($finding[0]) && is_a($finding[0], 'finding')) {
+                /** @var finding $tmp */
                 $tmp = $finding[0];
 
                 if(preg_match("/Not a Finding|Not Applicable/i", $status)) {
@@ -340,9 +336,9 @@ foreach ($objSS->getWorksheetIterator() as $wksht) {
             }
         }
 
-        $db->update_Running_Scan($base_name, ['name' => 'perc_comp', 'value' => (($row->getRowIndex() - 10) / $row_count) * 100]);
+        $db->update_Running_Scan($base_name, ['name' => 'perc_comp', 'value' => (($row->getRowIndex() - 10) / $highestRow) * 100]);
         if (PHP_SAPI == 'cli') {
-            print "\r" . sprintf("%.2f%%", (($row->getRowIndex() - 10) / $row_count) * 100);
+            print "\r" . sprintf("%.2f%%", (($row->getRowIndex() - 10) / $highestRow) * 100);
         }
     }
 

inc/database.inc

@@ -1271,7 +1271,7 @@ class db_helper
             "Executing: $this->query_type\t" .
             "SQL: {$errmsg}" . PHP_EOL, FILE_APPEND);
 
-        if ($errno == E_DEBUG && $this->result && LOG_LEVEL == E_DEBUG) {
+        if ($errno == E_DEBUG && $this->result && LOG_LEVEL == E_DEBUG && is_a($this->result, 'mysqli_result')) {
             file_put_contents(realpath(LOG_PATH . '/db.debug'), print_r($this->result, true), FILE_APPEND);
         }
         elseif ($errno == E_ERROR && $this->c->error) {

inc/helper.inc

@@ -125,6 +125,7 @@ function getValue($xml, $path, $starting = null, $keep = false)
  */
 function FileDetection($filename)
 {
+    $name = [];
     $name['base_name'] = basename($filename);
     // print "\tCheck if exists".PHP_EOL;
     if (!file_exists($filename)) {

reference/stigs/.gitignore

@@ -1,2 +1,5 @@
 /*.xml
 /*.csv
+/*.xsl
+/*.jpg
+/*.JPG